Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857516.1_cds_XP_016513447.1_25988
CDS Infomation

[gene=LOC107830417] [db_xref=GeneID:107830417] [protein=U3 snoRNP-associated protein-like YAOH] [protein_id=XP_016513447.1] [location=join(4471..4919,5641..5977,6407..6631,8161..8383,8542..8717,9571..9636,10355..10432)] [gbkey=CDS]
Sequence

ATGAAGGCCAAGAACCTGAAAAAGAAGAAAGCTTCAGCTCAAAAAGGAAACATCCAGAAT
GGAAAAAAGAGGTTTTCAATTGAAAATGACCCATTTTTCAACGACTCGAAAAGGCGAAAG
AGGTTTGGAGATGATGAAGATATAGAGAGCAGTGATGATGACGAGGAGGAACTTTATGGT
TCTGATGATGAAGGAATTAGGGATAAGAAAGAGGGTAAAGAGGAAGAACAGGAGGAGGAG
GAGACGGCGGCGGAGAGGAGAAAGAGGGTGGCGGAGGCATATTTGAAGAGAATAAGGGAG
TCGGCGAGGAGGGAAGAGGAAGAAAGAGAGAGTGAGGACGAAAGGGGTAGAGAGGAGAGA
GAAGGGATGAGGGACTCAGTGGTGGCGAACATTTTGCAGCAGGAGCAGATGGAGGAGAGT
GGTCGTGTCAGAAAAGCTATTGCTTCCAGGATTCAAAAGCCGACTGAGGGATTTCGCCTT
TTAGTGAAACATCGACAGTCCGTAACTGCTGTCACTCTATCTGAGGATGACTTAAAAGGA
TTTTCATCTTCTAAAGATGGTACTATTGCTAGCTGGGACGTGGACAGTGGAAAGGCAGAA
AAGTATGCTTGGCCTACTGATGAAGTTTTGAAGTCGCATGGTGCTAAGGAGCCACAAGGT
CGAGCAAAGAAACATAGTAAGCATGTTTTAGCTTTAGCTGTCAGCTCTGATGGCCGCTAT
TTGGCAAGTGGAGGCTTGGATCGTCACATTCATTTGTGGGATGTTCGAACACGGCAGCAT
ATTAAGGCATTCCCCGGTCATAAAGGACCTGTTTCGTGTTTGACATTCAGACAAGGATCT
TCGGAACTGTTTTCAGGGTCGTTTGATCGATCCATCAAGATATGGAATGTGGAAGATAGA
GCTTATGTGAACACTTTATTCGGTCATCAAAGTGAAGTTCTGTCCATTGATTCCTTGAGG
AAAGAAAGGGTGTTGACTGTTGGACGAGACCGAACCATGCACTTATGGAAGGTTCCAGAG
GAATCTCAATTGATATTTCGTGCTTCAGCAACAAACCTTGAATGCTGCTGTTTCATCAAT
AATGACGAGTTTTTATCTGGTTCTGATGATGGAAGTATTGAGCACTGGAACGTATTAAGG
AAGAAACCTGTCCACATTGTAAAAAATGCACATGCTTCGTTGCAATCAGTGGGAATCGAA
CCGAGAAATGGGGCTCTATCAAATGGTCACATGGAAAATGGCACCTTGAATCCTGAGAGT
CGTTCCTCATCAGCACTCTCTTGGGTTAGTGCGCTGACAGTCTGCAGAAATAGTGATCTT
GCTGCATCAGGAGCTGGCAATGGGTCAGTTCGTTTGTGGGCAATTGAAAATGAATCCAAA
GGAATCCGGCCGTTGTTTGAGCTCCCAGTGGCTGGATTTATAAATTCTTTAATTTTTTCA
AAATCCGGGCAGTTCTTGGTTGCTGGAGTAGGACAGGAACCTCGCTTAGGAAGGTGGGGA
CGTATTGCTGATGTTCGAAATGGAGTTCTCGTGCAACCTTTGAAGCTTTCGTGA

Peptide Sequence

PEP ID

XP_016513447.1
PEP Infomation

PREDICTED: U3 snoRNP-associated protein-like YAOH [Nicotiana tabacum]
Sequence

MKAKNLKKKKASAQKGNIQNGKKRFSIENDPFFNDSKRRKRFGDDEDIESSDDDEEELYG
SDDEGIRDKKEGKEEEQEEEETAAERRKRVAEAYLKRIRESARREEEERESEDERGREER
EGMRDSVVANILQQEQMEESGRVRKAIASRIQKPTEGFRLLVKHRQSVTAVTLSEDDLKG
FSSSKDGTIASWDVDSGKAEKYAWPTDEVLKSHGAKEPQGRAKKHSKHVLALAVSSDGRY
LASGGLDRHIHLWDVRTRQHIKAFPGHKGPVSCLTFRQGSSELFSGSFDRSIKIWNVEDR
AYVNTLFGHQSEVLSIDSLRKERVLTVGRDRTMHLWKVPEESQLIFRASATNLECCCFIN
NDEFLSGSDDGSIEHWNVLRKKPVHIVKNAHASLQSVGIEPRNGALSNGHMENGTLNPES
RSSSALSWVSALTVCRNSDLAASGAGNGSVRLWAIENESKGIRPLFELPVAGFINSLIFS
KSGQFLVAGVGQEPRLGRWGRIADVRNGVLVQPLKLS

Transcript Sequence

Gene sequence data has not been registered.